DefineClones
Diversity
Unique clonotypes
28,709
Shannon entropy
9.473
Inverse Simpson
3,264.973
Clonality index
0.077
Gini-Simpson
1
Evenness (Pielou)
0.923
Richness (Chao1)
42,066
Gini coefficient
0.581
Clone size
Top clone
clone_15287
Top clone freq
0.6%
Top clone count
13,869
D10
77
D10 %
1000.3%
D50 index
3,602
D50 %
5000.0%
Mean
82.401
Median
46
Max
13,869
Distance Distribution
1/2
Linkage: defineclonesMetric: hamming_normalizedThreshold: 0.1615,915 intra / 3,465,376 inter distances
Intra-cloneInter-cloneThreshold