DefineClones
Diversity
Unique clonotypes
24,483
Shannon entropy
9.339
Inverse Simpson
2,932.132
Clonality index
0.076
Gini-Simpson
1
Evenness (Pielou)
0.924
Richness (Chao1)
29,416
Gini coefficient
0.572
Clone size
Top clone
clone_808
Top clone freq
0.7%
Top clone count
23,967
D10
67
D10 %
1003.4%
D50 index
3,273
D50 %
5000.5%
Mean
144.92
Median
88
Max
23,967
Distance Distribution
1/2
Linkage: defineclonesMetric: hamming_normalizedThreshold: 0.1618,328 intra / 1,479,076 inter distances
Intra-cloneInter-cloneThreshold