DefineClones
Diversity
Unique clonotypes
64,931
Shannon entropy
10.418
Inverse Simpson
6,346.821
Clonality index
0.06
Gini-Simpson
1
Evenness (Pielou)
0.94
Richness (Chao1)
81,277
Gini coefficient
0.539
Clone size
Top clone
clone_25032
Top clone freq
0.6%
Top clone count
56,554
D10
281
D10 %
1001.3%
D50 index
10,949
D50 %
5000.1%
Mean
155.309
Median
111
Max
56,554
Distance Distribution
1/2
Linkage: defineclonesMetric: hamming_normalizedThreshold: 0.1649,694 intra / 8,154,440 inter distances
Intra-cloneInter-cloneThreshold