DefineClones
Diversity
Unique clonotypes
18,806
Shannon entropy
9.324
Inverse Simpson
4,394.587
Clonality index
0.053
Gini-Simpson
1
Evenness (Pielou)
0.947
Richness (Chao1)
23,638
Gini coefficient
0.507
Clone size
Top clone
clone_2518
Top clone freq
0.7%
Top clone count
53,003
D10
250
D10 %
1000.9%
D50 index
3,669
D50 %
5000.2%
Mean
415.471
Median
329
Max
53,003
Distance Distribution
1/2
Linkage: defineclonesMetric: hamming_normalizedThreshold: 0.1615,806 intra / 613,135 inter distances
Intra-cloneInter-cloneThreshold