DefineClones
Diversity
Unique clonotypes
12,945
Shannon entropy
8.98
Inverse Simpson
3,488.409
Clonality index
0.052
Gini-Simpson
1
Evenness (Pielou)
0.948
Richness (Chao1)
15,990
Gini coefficient
0.495
Clone size
Top clone
clone_99
Top clone freq
0.8%
Top clone count
66,618
D10
193
D10 %
1000.8%
D50 index
2,609
D50 %
5001.2%
Mean
631.988
Median
515
Max
66,618
Distance Distribution
1/2
Linkage: defineclonesMetric: hamming_normalizedThreshold: 0.1611,196 intra / 287,186 inter distances
Intra-cloneInter-cloneThreshold