DefineClones
Diversity
Unique clonotypes
121,213
Shannon entropy
10.634
Inverse Simpson
2,205.562
Clonality index
0.092
Gini-Simpson
1
Evenness (Pielou)
0.908
Richness (Chao1)
163,748
Gini coefficient
0.571
Clone size
Top clone
clone_6877
Top clone freq
1.0%
Top clone count
64,619
D10
42
D10 %
1000.5%
D50 index
15,565
D50 %
5000.1%
Mean
53.84
Median
33
Max
64,619
Distance Distribution
1/2
Linkage: defineclonesMetric: hamming_normalizedThreshold: 0.1671,508 intra / 79,060,373 inter distances
Intra-cloneInter-cloneThreshold